Atr-MIR166d

Basic info.

• miRNA locus ID
• Atr-MIR166d

• miRNA locus accession
• PmiREN000203

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00128  402253  402382  -

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

  TATCCGCATGCATGT  T        TT G    CT   G C      ATTTA   --AA    - TT
                 TG GGGGAATG  G CTGG  CGA G CATCCG     GGA    GCCG C  
                 || ||||||||  | ||||  ||| | ||||||     |||    |||| |   
                 AC CCCCTTAC  C GACC  GCT C GTGGGC     CCT    CGGT G  
TATTAGGCCCAACACAA  T        TT G    AG   A A      -----   GATA    T GC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 1
• Chromosome: AmTr_v1.0_scaffold00128
• Cluster start: 402029
• Cluster end: 402382

Target gene info.[+]