Atr-MIRN72

Basic info.

• miRNA locus ID
• Atr-MIRN72

• miRNA locus accession
• PmiREN000385

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold04494  942  1172  +

• Comments
• A member of family MIRN72

• Confidence level
• 

Secondary strurture and sequence

  ATTTAGGATAATCAA        TG       -CCA      CAAG T    CTTT   ---      TT   -TCCCTTC  --    CCTATC     ATAGA     -       T  GATA
                 GCTCGAAT  ATATCTT    CCACGT    G GACA    ACG   TTAGAG  ATA        CT  TGCA      GAGAA     ATTGA CTAATCC AA    
                 ||||||||  |||||||    ||||||    | ||||    |||   ||||||  |||        ||  ||||      |||||     ||||| ||||||| ||     
                 TGAGCTTG  TATGGAA    GGTGTA    C CTGT    TGC   AGTCTC  TAT        GA  ACGT      TTCTT     TAGCT GGTTGGG TT    
GCCGGACAAAGAGCCAA        --       CAGA      ---A -    TTTT   CCT      CC   TTTTTGTT  TT    ----AT     ---GG     T       T  GGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]