Atr-MIRN70

Basic info.

• miRNA locus ID
• Atr-MIRN70

• miRNA locus accession
• PmiREN000383

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00013  6986813  6986982  +

• Comments
• A member of family MIRN70

• Confidence level
• 

Secondary strurture and sequence

   G       -    ATC     TG  C      C          AAATG            ---AAAA    C TTTGAGGCATTAG
  C ACCGATT CCAG   CGGAT  GG GGTTCC ATCCAGATCG     TTTTCAAACCCT       CACA A             
  | ||||||| ||||   |||||  || |||||| ||||||||||     ||||||||||||       |||| |             G
  G TGGTTAA GGTT   GCCTA  CC CTAAGG TAGGTCTAGC     AAAAGTTTGGGA       TGTT A             
AG G       A    -AA     GT  A      T          -CGTA            CTACATA    - CGCTAACAGTGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]