Atr-MIRN25c

Basic info.

• miRNA locus ID
• Atr-MIRN25c

• miRNA locus accession
• PmiREN000372

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00013  868161  868306  +

• Comments
• A member of family MIRN25

• Confidence level
• 

Secondary strurture and sequence

   T      C                 A     C     GA         C        A  TAA  C   TGT
  T TTTGGT ATTAGGAGGGGTGTGAC TCATC ACATG  GTGTGACAT ACCCACAT GA   CA TAG   
  | |||||| ||||||||||||||||| ||||| |||||  ||||||||| |||||||| ||   || |||    
  A AAACCA TAATCCTCCCCACACTG AGTAG TGTAC  CACACTGTA TGGGTGTA CT   GT ATT   
GT T      T                 C     A     TC         A        -  -TC  A   TAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]