Atr-MIRN47e

Basic info.

• miRNA locus ID
• Atr-MIRN47e

• miRNA locus accession
• PmiREN000369

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00069  1417031  1417152  +

• Comments
• A member of family MIRN47

• Confidence level
• 

Secondary strurture and sequence

            CT   C              C   G       T        ----     TT
  AGGACCCCAA  GAT ACCATTAAATTTGG ATA ATCTTTA AAAAGTTA    TCACA  
  ||||||||||  ||| |||||||||||||| ||| ||||||| ||||||||    |||||   
  TCCTGGGGTT  CTA TGGTAATTTAAACC TGT TAGAGAT TTTTCAGT    GGTGT  
CA          TC   A              A   A       C        TCAG     GG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]