Atr-MIRN58

Basic info.

• miRNA locus ID
• Atr-MIRN58

• miRNA locus accession
• PmiREN000368

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00068  239997  240111  +

• Comments
• A member of family MIRN58

• Confidence level
• 

Secondary strurture and sequence

 T    --C     AA                      ATA        --TT   TGAA
  TGGA   CGTAT  GTAGAAATGCGGTCCAGCCCGC   AAACAATT    TCT    
  ||||   |||||  ||||||||||||||||||||||   ||||||||    |||    G
  ACCT   GTATA  TATCTTTACGTCAGGTCGGGCG   TTTGTTAA    AGA    
GT    ACT     -A                      AAC        CAAC   TAAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]