Atr-MIRN47d

Basic info.

• miRNA locus ID
• Atr-MIRN47d

• miRNA locus accession
• PmiREN000365

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00049  3469594  3469715  +

• Comments
• A member of family MIRN47

• Confidence level
• 

Secondary strurture and sequence

        CCAAAT   CA                 G       C      G ----     TA
  AGGACT      GAT  CTATTAAATTTGGCATA ATCTTTA AAAAGT A    TCACA  
  ||||||      |||  ||||||||||||||||| ||||||| |||||| |    |||||   
  TCCTGA      TTA  GGTAATTTAAACTGTGT TAGAAAT TTTTCA T    GGTGT  
CA      AACTTC   AC                 A       C      G TCAG     GG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]