Atr-MIRN40c

Basic info.

• miRNA locus ID
• Atr-MIRN40c

• miRNA locus accession
• PmiREN000363

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00047  2268571  2268692  -

• Comments
• A member of family MIRN40

• Confidence level
• 

Secondary strurture and sequence

      -   TAAAT     C            C        C  A        ----     TG
  AGGA CCC     GATCA CATTAAATTTGG ATAGATTT TA AAAGGTTA    TCACA  
  |||| |||     ||||| |||||||||||| |||||||| || ||||||||    |||||   
  TCCT GGG     CTAGT GTAATTTAAATC TATCTAGA AT TTTTCAGT    GGTGT  
CA    A   -TATT     A            A        A  C        TTAG     GG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]