Atr-MIRN57

Basic info.

• miRNA locus ID
• Atr-MIRN57

• miRNA locus accession
• PmiREN000362

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00038  3536741  3536931  -

• Comments
• A member of family MIRN57

• Confidence level
• 

Secondary strurture and sequence

   AAA    TTG     T     C      CA    T    --------    --  TT ---   ATTTATCATTTCAGGGTTTCTCTGAATTTAGAAACTAC
      GATG   ACCCT GTTTT TTTAAA  GGAT TGGC        TCAG  GA  G   CCC                                      
      ||||   ||||| ||||| ||||||  |||| ||||        ||||  ||  |   |||                                       
      TTAC   TGGGG TAGAA GAGTTT  CCTA ACCG        ATCT  GA  T   TGA                                      
TTAATG    -TG     C     T      CC    T    CTTTAACC    GC  -- ACC   ATTAATTTAACTCGGAACCATACCTTTGGATGATTCAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]