Atr-MIRN55

Basic info.

• miRNA locus ID
• Atr-MIRN55

• miRNA locus accession
• PmiREN000359

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00030  4122723  4122854  -

• Comments
• A member of family MIRN55

• Confidence level
• 

Secondary strurture and sequence

  GTTGA   GA               C         T        CCCACATA      TAAATGT
       AAG  GGGTGTGACATCATC ATGTGGGGT TGACATCA        GAGCAT       
       |||  ||||||||||||||| ||||||||| ||||||||        ||||||        
       TTC  CCCATACTGTAGTAG TGTACTCCA ACTGTGGT        CTCGTG       
TCAATAA   TC               A         C        TGATATAC      TAATCAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]