Atr-MIRN53

Basic info.

• miRNA locus ID
• Atr-MIRN53

• miRNA locus accession
• PmiREN000356

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00023  2754157  2754245  -

• Comments
• A member of family MIRN53

• Confidence level
• 

Secondary strurture and sequence

AGTT   TG      ----   ATAATC       C       TTAA
    GCA  TGGACA    TGG      CTATCAG TCATTTA    
    |||  ||||||    |||      ||||||| |||||||    A
    CGT  ACCTGT    ACC      GATAGTC AGTAGGT    
  AT   TA      AGAA   GACACA       T       CGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]