Atr-MIRN49

Basic info.

• miRNA locus ID
• Atr-MIRN49

• miRNA locus accession
• PmiREN000349

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00016  155156  155251  -

• Comments
• A member of family MIRN49

• Confidence level
• 

Secondary strurture and sequence

 ATCTT    AA  -      C           TTCAT     T TTTC
      GATA  GA GATAGT TGGTAGAAAGA     ATAGT C    
      ||||  || |||||| |||||||||||     ||||| |     
      CTAT  CT CTATCA GCCATCTTTCT     TATCA G    
CTATAC    CG  T      T           TGATC     T CCAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]