Atr-MIRN47a

Basic info.

• miRNA locus ID
• Atr-MIRN47a

• miRNA locus accession
• PmiREN000345

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00007  5418980  5419101  +

• Comments
• A member of family MIRN47

• Confidence level
• 

Secondary strurture and sequence

         C   T      C              A   CT     A      ----     TG
  AGGATCT AAA GATCAT ATTAAATTTGGCAT GAT  TTGGA AAGTTA    TCGCA  
  ||||||| ||| |||||| |||||||||||||| |||  ||||| ||||||    |||||   
  TCCTGGA TTT CTAGTA TAATTTAAACCGTA CTA  GATCT TTCAGT    AGTGT  
CA       A   C      A              C   TT     A      TCAG     GG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]