Atr-MIRN44

Basic info.

• miRNA locus ID
• Atr-MIRN44

• miRNA locus accession
• PmiREN000342

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00003  3014041  3014169  +

• Comments
• A member of family MIRN44

• Confidence level
• 

Secondary strurture and sequence

  ATGTATATAAAA                                   T     ----C     AA
              ATATATAATATTTTAATAACATGACTGGATTAACC GTTTC     CATCC  
              ||||||||||||||||||||||||||||||||||| |||||     |||||  A
              TATATATTATAAAATTATTGTACTGGCCTAATTGG CAAGG     GTAGG  
TTAAGATAAAGAAA                                   T     ATTCA     AT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]