Atr-MIRN43a

Basic info.

• miRNA locus ID
• Atr-MIRN43a

• miRNA locus accession
• PmiREN000341

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00002  3734095  3734199  +

• Comments
• A member of family MIRN43

• Confidence level
• 

Secondary strurture and sequence

     T   T  A                   TA    ---   A    T  CACT
  CAT TTA TT GATGGTGTGGATTTGACAT  TCTT   AGA GATG GT    
  ||| ||| || |||||||||||||||||||  ||||   ||| |||| ||     
  GTA AAT AA CTACCATATCTAAACTGTG  AGAA   TCT TTGC CG    
AG   T   C  C                   -C    AAT   G    -  TTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]