Atr-MIRN37c

Basic info.

• miRNA locus ID
• Atr-MIRN37c

• miRNA locus accession
• PmiREN000337

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold03173  10  269  -

• Comments
• A member of family MIRN37

• Confidence level
• 

Secondary strurture and sequence

TTATATTTCTCAT       -     T    -GA  -   G  TCG     -  ATTATA  T         ---  -  GTATATTGATATTTTTATTTTCCTCGAACAATTATAATGCAAGGGATAAAGGTGTTTC
             GGGCTGT TTGTC CGGC   GA ATT CC   AGAAC CC      GG GAAAGTGAA   AG TG                                                          
             ||||||| ||||| ||||   || ||| ||   ||||| ||      || |||||||||   || ||                                                           
             TCCGATA AACAG GCTG   CT TAA GG   TCTTG GG      AA GGGCTCAGT   TT AG                                                          
            G       T     -    AAA  A   A  -TA     T  ------  -         AGG  G  AGATGGACTGAAAAATTGGGCACTTTAAAACGTTCCCCCGTTGTGACTGAGGTTGTTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]