Atr-MIRN37b

Basic info.

• miRNA locus ID
• Atr-MIRN37b

• miRNA locus accession
• PmiREN000336

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00555  13216  13475  -

• Comments
• A member of family MIRN37

• Confidence level
• 

Secondary strurture and sequence

TTATATTTCTCAT       -      C   -GA  -   G  TCG     -  ATTATA  T         ---  -  GTATATTGATATTTTTATTTTCCTCGAACAATTGTAATGCTAGGGATAAAGGTGTTTC
             GGGCTGT TTGTCT GGC   GA ATT CC   AGAAC CC      GG GAAAGTGAA   AG TG                                                          
             ||||||| |||||| |||   || ||| ||   ||||| ||      || |||||||||   || ||                                                           
             TCCGATA AACAGA CTG   CT TAA GG   TCTTG GG      AA GGGCCCAGT   TT AG                                                          
            T       T      -   AAA  A   A  -TA     T  ------  -         AGG  G  AGATGGACTGAAAAATTGGGCACCTTAAAACGTTCCCCCGTTGTGACTGAGGTTGCTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]