Atr-MIRN35c

Basic info.

• miRNA locus ID
• Atr-MIRN35c

• miRNA locus accession
• PmiREN000331

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00079  2000500  2000628  -

• Comments
• A member of family MIRN35

• Confidence level
• 

Secondary strurture and sequence

  TATTATATAC       TT                   --------------        A      TCTT
            TTTCATC  GTGGTTCAAAATTTATATC              ACTGTTTT TTTTAA    
            |||||||  |||||||||||||||||||              |||||||| ||||||     
            GAAGTAG  CACCAAGTTTTAAGTATAG              TGATAAAA AAGATT    
GTCTGCACTCTA       CC                   CAAAAAACTTAAAA        -      TTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]