Atr-MIRN27

Basic info.

• miRNA locus ID
• Atr-MIRN27

• miRNA locus accession
• PmiREN000313

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00032  906046  906191  +

• Comments
• A member of family MIRN27

• Confidence level
• 

Secondary strurture and sequence

       TT  TTA       GT T                   A          C    A  ATATTTAAAT  -  CT
  TTTTT  TT   AGGATGG  G GACGTCATCTACATGGGGT TGACATCATC ACAT GA          GC CA  
  |||||  ||   |||||||  | ||||||||||||||||||| |||||||||| |||| ||          || ||   
  AAAAA  AG   TCCTACC  C CTGCAGTAGATGTACCCCA ATTGTAGTAG TGTA CT          CG GT  
AT     CC  TAA       AT -                   C          A    C  ----------  T  GA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]