Atr-MIRN23a

Basic info.

• miRNA locus ID
• Atr-MIRN23a

• miRNA locus accession
• PmiREN000308

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00014  5935402  5935613  -

• Comments
• A member of family MIRN23

• Confidence level
• 

Secondary strurture and sequence

       -   C     TAA      T      TA    AA               CCTC   T      T       G     AGATTTAGGAAGCTTGATGAATG
 ATTTGA AGA CCAAA   ATTTTG TCAAGA  GTGC  CTTATTCATGGGTAG    TCG AGTGTC GCACATC TCTGA                       
 |||||| ||| |||||   |||||| ||||||  ||||  |||||||||||||||    ||| |||||| ||||||| |||||                       G
 TAAATT TCT GGTTT   TAAAAC AGTTCT  CACG  GGATAAGTATTCGTC    AGC TCGTAG TGTGTAG CCCTT                       
C      C   A     TCA      T      CC    CC               ATTT   T      T       -     TATTCGGTACCGGAAGGGAGAGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]