Atr-MIR8613

Basic info.

• miRNA locus ID
• Atr-MIR8613

• miRNA locus accession
• PmiREN000303

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00007  3482872  3483067  +

• Comments
• A member of family MIR8613

• Confidence level
• 

Secondary strurture and sequence

   TCA  ---   C  -   T  C  -    A  -          CA  --       ---  GAA              CA  --  CA  --       GATTATATGCT
ATT   GA   CTT GT GAC CA CT CAAG TA TCCAATTTGA  TC  TAATGAG   TG   ATGATTATGACCTC  TG  TA  AA  AGATGAG           
|||   ||   ||| || ||| || || |||| || ||||||||||  ||  |||||||   ||   ||||||||||||||  ||  ||  ||  |||||||            
TTT   AG   TTG AA TAC TG GT GGGT TC GTAGGTTAAA  CT  AGATTAC   TC   ACTGTTAATATTGG  AG  AT  AT  TTTCTAT           
   ---  TAC   -  A   -  T  A    -  A          --  AC       CGT  ---              --  TA  --  TA       TTACCAGAGGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]