Atr-MIR8603

Basic info.

• miRNA locus ID
• Atr-MIR8603

• miRNA locus accession
• PmiREN000301

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00116  1378349  1378518  +

• Comments
• A member of family MIR8603

• Confidence level
• 

Secondary strurture and sequence

   -------       TTACTT      C         T              T AAATGC    -A  TGGAACGTGAAGGTATGGCCGAGC
TCC       GATTCTT      TACATG CGAATCACA GCTCAAAGAAATCC C      GAAG  CT                        
|||       |||||||      |||||| ||||||||| |||||||||||||| |      ||||  ||                         
AGG       CTAAGGG      ATGTAC GCTTGGTGT CGAGTTTCTTTAGG G      CACC  AC                        
   TTCTACT       -----T      A         T              T -----A    CT  AGAGGTTTAAATGGTGGGACTATC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]