Atr-MIR8588

Basic info.

• miRNA locus ID
• Atr-MIR8588

• miRNA locus accession
• PmiREN000296

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00004  6062181  6062366  +

• Comments
• A member of family MIR8588

• Confidence level
• 

Secondary strurture and sequence

  A                                        ---C    - CGTGAGACTAGGGGTCACAGAGATTAGGCTTTACCAGAACAAC
   TGGGAAGAGATGAAAAACACCGAGCTCCCAGGGTTAATGG    GGTC T                                           
   ||||||||||||||||||||||||||||||||||||||||    |||| |                                            
   ACCCTTCTCTACTTTTTGTGGTTTGAGGGTCCTAATTACC    CCAG G                                           
ATA                                        TTCA    C TCTCTAGTCCGCTACATCTAATTAGAATAGAAAACTCAAGAGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]