Atr-MIR8584

Basic info.

• miRNA locus ID
• Atr-MIR8584

• miRNA locus accession
• PmiREN000292

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00040  69956  70085  +

• Comments
• A member of family MIR8584

• Confidence level
• 

Secondary strurture and sequence

     TC A       TTT  A      AA     T   C           CA   C    ----     T
    G  A GACATTA   GG CACAGC  TGACG CCA GGTTCAAATCT  TTG CGAT    CTTTC 
    |  | |||||||   || ||||||  ||||| ||| |||||||||||  ||| ||||    ||||| A
    C  T TTGTAGT   CC GTGTCG  GCTGC GGT CCAAGTTTAGG  AGC GTTG    GAAAG 
CTAT GA A       --T  G      -C     T   C           --   A    AAAT     A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]