Atr-MIR8583

Basic info.

• miRNA locus ID
• Atr-MIR8583

• miRNA locus accession
• PmiREN000291

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00039  3157575  3157793  -

• Comments
• A member of family MIR8583

• Confidence level
• 

Secondary strurture and sequence

              A        C        T A             ---  AGGTTTCCATTCTTATCAATGCCTAACCCATAATTAGTGGTCATAAGTGGGAATGGAAA
  GGGTTGAGGTCA GGTGGTAG ACCACTTG G CTTAGCTACTGGA   CT                                                           
  |||||||||||| |||||||| |||||||| | |||||||||||||   ||                                                            
  CCTAATTTCAGT CCATCATC TGGTGAAC C GAGTCGATGACCT   CC                                                           
CC            A        A        T G             GAT  AAAGGGTGACTACTGATGATTAATACCCCATCCTTATGTCAGAGTCGATGGCCAGATCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]