Atr-MIR8582

Basic info.

• miRNA locus ID
• Atr-MIR8582

• miRNA locus accession
• PmiREN000290

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00039  1732374  1732503  +

• Comments
• A member of family MIR8582

• Confidence level
• 

Secondary strurture and sequence

  C   -CTT  --              G    A         ---CA  A  ---    TTTA  TGAA
AG GAG    TC  TCTGCAAGTTATGT ATGA CTCCTACTA     GG GC   GATT    TC    
|| |||    ||  |||||||||||||| |||| |||||||||     || ||   ||||    ||     
TC CTC    AG  AGACGTTCGATGCA TACT GAGGATGAT     CC CG   CTAG    AG    
  A   CTAC  AA              G    -         ATAAG  C  AAA    TTTC  TGCA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]