Atr-MIR8575

Basic info.

• miRNA locus ID
• Atr-MIR8575

• miRNA locus accession
• PmiREN000286

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00029  4695349  4695594  +

• Comments
• A member of family MIR8575

• Confidence level
• 

Secondary strurture and sequence

 T  - T  G  -        T  -      C  -  C  -               A  -        CT  -- A  -   T  -            TTA  -       C  - T  - AG AA -- --   TTTTTA
T TT T TT AA ATGTTGTA AG ATGTGT GT GT TG AAAGGTCAATTTTGA AT TGACGTTT  GA  C CT TGT TC TGTGTTAGATAT   CA TTTGTAT CA T TT T  G  A  C  ACA      
| || | || || |||||||| || |||||| || || || ||||||||||||||| || ||||||||  ||  | || ||| || ||||||||||||   || ||||||| || | || |  |  |  |  |||       
G AG A AA AG TTTACAAC AT TCTGTA CA CG CA ACTTTTTAGTTAAAA TT TAACTGCA  AA  T TG GAA CA AGGCACAGTTTA   TG GTGAATA TA G TA A  G  A  C  TGT      
 -  T -  T  A        -  C      -  A  -  A               -  A        --  AC -  C   -  T            ---  C       -  A -  T -- -- AA AC   GTTGAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]