Atr-MIR8570

Basic info.

• miRNA locus ID
• Atr-MIR8570

• miRNA locus accession
• PmiREN000283

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00002  9634447  9634694  -

• Comments
• A member of family MIR8570

• Confidence level
• 

Secondary strurture and sequence

            C         T         A     A    CG   A  A A    C    AA    ACTTGTATTAAAAATACATGGTGTCTTTTGTATTCATTTTCATGTGTATATATATA
  TTTTTTTGAA TTTGAGTCT GTCAATGAC CACTC CAAC  CCC AT T AAAT TGAC  ACCT                                                        
  |||||||||| ||||||||| ||||||||| ||||| ||||  ||| || | |||| ||||  ||||                                                         
  AAGAAGATTT AAATTCAGA CAGTTACTG GTGAG GTTG  GGG TA A TTTA ACTG  TGTT                                                        
AA          C         T         C     G    AT   C  A C    C    CC    CTCACTAACACTGGAGAAACATAATTTGTATTTATCAGAGAAAGATACGAAAAAGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]