Atr-MIR8565e

Basic info.

• miRNA locus ID
• Atr-MIR8565e

• miRNA locus accession
• PmiREN000277

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00159  262467  262578  +

• Comments
• A member of family MIR8565

• Confidence level
• 

Secondary strurture and sequence

      G  -   C  -                                 ----   TGA
CCCAAA GA TCA CA TTAAATTTGGCACAGATCTCTAGAAAAGTTATC    ACA   
|||||| || ||| || |||||||||||||||||||||||||||||||||    |||    
TGGGGT TT CTA GT GTAATTTAAACCGTGTCTAGAGATCTTTTCAGT    GGT   
      -  A   -  A                                 TCAG   GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]