Atr-MIR8558a

Basic info.

• miRNA locus ID
• Atr-MIR8558a

• miRNA locus accession
• PmiREN000268

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00017  2901056  2901167  +

• Comments
• A member of family MIR8558

• Confidence level
• 

Secondary strurture and sequence

  TG   T          T G    -           A       GGCTT    ATTC
    TGG AGCCGGGGGT T AGGT TGGGCGGGTTC GGAAGGC     TTAT    
    ||| |||||||||| | |||| ||||||||||| |||||||     ||||     
    ATC TCGGCCTTCA A TCCA ATCCGCCTAAG CCTTTCG     AATG    
CCCT   T          T G    T           -       ATCCC    ATTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]