Atr-MIR8555

Basic info.

• miRNA locus ID
• Atr-MIR8555

• miRNA locus accession
• PmiREN000267

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00011  6531715  6531863  +

• Comments
• A member of family MIR8555

• Confidence level
• 

Secondary strurture and sequence

                                           G  CCT  --C  -  A  -       TAGTATTG
ACATACACCACGGGGCCTTATCCTGTAGATGTCTAGTTAACTC TT   AA   CA AG CA AAGAGGT        
||||||||||||||||||||||||||||||||||||||||||| ||   ||   || || || |||||||        A
GTTGTATGTGGTGTTCCGGAGTAGGATATCTACGGATCAATTG AG   AG   TT GT TT GTTTCTC        
                                           -  --G  ATT  A  -  C       TATACCTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]