Atr-MIR399

Basic info.

• miRNA locus ID
• Atr-MIR399

• miRNA locus accession
• PmiREN000258

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00069  2597392  2597519  +

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

TAA    -  -  -      T      TT      A       A -T    AACAAAATAATTCAG
   TGGG CA AA CCAGTT CAGGGC  CTCTCC TTGGCAG C  TGCA               
   |||| || || |||||| ||||||  |||||| ||||||| |  ||||               A
   ACCC GT TT GGTCAA GTCCCG  GAGAGG AACCGTC G  ACGT               
 CA    T  C  C      T      TT      A       C TT    CCATCTTACACTCAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]