Atr-MIR395b

Basic info.

• miRNA locus ID
• Atr-MIR395b

• miRNA locus accession
• PmiREN000237

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00123  806997  807196  +

• Comments
• A member of family MIR395

• Confidence level
• 

Secondary strurture and sequence

  TA       A A C  T           -T           ATG    G G      ACAAGAGAGAAAGAGA   AG   -A        T       - G    AGA
    TGTTGGG G C CC GGAGTTCCCCC  ACACTTCAGCG   TGAT T CTCTCT                TTT  TTT  TGCTGAAG ATTTTAG A AGAG   
    ||||||| | | || |||||||||||  |||||||||||   |||| | ||||||                |||  |||  |||||||| ||||||| | ||||   G
    ATAACTC C G GG TCTCAAGGGGG  TGTGAAGTCGC   GTTG G GAGAGA                GAG  AGA  ACGGTTTT TGAAATC T TTTC   
TCTG       C A A  T           TT           --A    A G      ----------------   AG   GA        C       G G    ATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]