Atr-MIR393a

Basic info.

• miRNA locus ID
• Atr-MIR393a

• miRNA locus accession
• PmiREN000233

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00009  6768992  6769100  +

• Comments
• A member of family MIR393

• Confidence level
• 

Secondary strurture and sequence

 G      -G          A    A            T       TTCAGT  AA
  GTTGCA  AGGGTGGAGA ATCC AAGGGATCGCAT GATCCTT      GC  
  ||||||  |||||||||| |||| |||||||||||| |||||||      ||  G
  TAACGT  TTCTACCTCT TAGG TTCTCTGGCGTA CTAGGAA      TG  
AA      AA          G    A            -       -CCTTT  GC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]