Atr-MIR319d

Basic info.

• miRNA locus ID
• Atr-MIR319d

• miRNA locus accession
• PmiREN000226

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00188  77611  77733  -

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

  AAGGAAAAATGCAAAAA             G  GA    GAAAGCACTTT    C T      GCT
                   TGGGAGCTCCTTT AG  CAAA           GGAT G CTTTTT   
                   ||||||||||||| ||  ||||           |||| | ||||||   C
                   ATCCTCGAGGGAA TC  GTTT           CCTA C GAGAAG   
TCCTATTTTTCTCTTCTTA             G  AG    -----------    - T      TTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]