Atr-MIR171d

Basic info.

• miRNA locus ID
• Atr-MIR171d

• miRNA locus accession
• PmiREN000217

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00003  7402112  7402221  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

G G       --   G   C                   T  AC     -  C   TA
 C CATGATT  TTG GTA GGTGTTGGCACGGTTCAAT CA  CACTG CA TGC  
 | |||||||  ||| ||| ||||||||||||||||||| ||  ||||| || |||  C
 G GTACTGA  AAC CGT CTATAACCGTGCCGAGTTA GT  GTGAT GT ACG  
G G       TC   G   A                   -  --     A  -   AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]