Atr-MIR169c

Basic info.

• miRNA locus ID
• Atr-MIR169c

• miRNA locus accession
• PmiREN000212

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00057  2391576  2391708  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

    A   A       CTTTTT           T    TG -----------CTAT    TCAAGCATAAGAGA
   A GGG TGGGGCA      GTAGCCAAGGA GACT  C               GCTC              
   | ||| |||||||      ||||||||||| ||||  |               ||||               
   T CCC ACTTCGT      CATCGGTTCCT CTGA  G               ATGG              
TAC C   -       ATTATT           T    GT AATCTTTGACTTCTT    TTTTCCTTCATTCG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]