Atr-MIR167c

Basic info.

• miRNA locus ID
• Atr-MIR167c

• miRNA locus accession
• PmiREN000208

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00002  9936729  9936841  -

• Comments
• A member of family MIR167

• Confidence level
• 

Secondary strurture and sequence

TTT   TG   --   TG       A    - -C           G   T     TTG
   AGC  AGG  AGG  GGAGTGA GCTG C  AGCATGATCTA GTT TGAGT   
   |||  |||  |||  ||||||| |||| |  ||||||||||| ||| |||||   T
   TCG  TCT  TCC  TCTCACT CGAC G  TCGTACTGGAT CAG ACTCA   
CTT   GT   AA   TT       C    A TC           A   T     TAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]