Atr-MIR166f

Basic info.

• miRNA locus ID
• Atr-MIR166f

• miRNA locus accession
• PmiREN000205

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00078  1243590  1243725  -

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

 CA       TC    -C           G       A      -   -TCCC  ACCTTGTTCCCCTTG
   GAAGAAA  AATG  AAGGAATGAAG TTGATCC AGATCA TGG     GC               
   |||||||  ||||  ||||||||||| ||||||| |||||| |||     ||                
   CTTCTTT  TTAC  TTCCTTACTTC GACTAGG TCTAGT ACC     CG               
CCA       TA    AT           G       C      T   CTCTT  AGTTATCGTACCTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]