Atr-MIR166b

Basic info.

• miRNA locus ID
• Atr-MIR166b

• miRNA locus accession
• PmiREN000201

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00004  1713841  1713993  +

• Comments
• A member of family MIR166

• Confidence level
• 

Secondary strurture and sequence

    GGGG        TT    T             A   A      --------------CTT   - TATGTGGATCATGTGAA
   T    GGAAAACC  TGTG GGAATGAGGTTTG TCC AGATCT                 TCC A                 
   |    ||||||||  |||| ||||||||||||| ||| ||||||                 ||| |                  
   A    CCTTTTGG  ACAC CCTTACTTCGGAC AGG TCTAGA                 ACG T                 
AAT -ACA        TC    C             C   C      TAAGTATCTTCTCCCAA   G TGTACGTTTCCACGTTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]