Atr-MIR165

Basic info.

• miRNA locus ID
• Atr-MIR165

• miRNA locus accession
• PmiREN000199

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00071  3736379  3736489  -

• Comments
• A member of family MIR165

• Confidence level
• 

Secondary strurture and sequence

     T        TGT      -    AG  TT      A             AGAGA
   GC CGTGTGAG   TTTGGG GGGA  GG  GTCTGG TCGAGGCCGCAGT     
   || ||||||||   |||||| ||||  ||  |||||| |||||||||||||     G
   CG GCACACTT   AAACTC CCCT  CT  CGGACC GGCTTCGGTGTCA     
AAG  T        --T      T    -G  -T      A             GTAGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]